منابع مشابه
Canberra distance on ranked lists
The Canberra distance is the sum of absolute values of the differences between ranks divided by their sum, thus it is a weighted version of the L1 distance. As a metric on permutation groups, the Canberra distance is a measure of disarray for ranked lists, where rank differences in top positions need to pay higher penalties than movements in the bottom part of the lists. Here we describe the di...
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Ranked gene lists are highly instable in the sense that similar measures of differential gene expression may yield very different rankings, and that a small change of the data set usually affects the obtained gene list considerably. Stability issues have long been under-considered in the literature, but they have grown to a hot topic in the last few years, perhaps as a consequence of the increa...
متن کاملNon-parametric Modeling of Partially Ranked Data
Statistical models on full and partial rankings of n items are often of limited practical use for large n due to computational consideration. We explore the use of non-parametric models for partially ranked data and derive efficient procedures for their use for large n. The derivations are largely possible through combinatorial and algebraic manipulations based on the lattice of partial ranking...
متن کاملRegmex, Motif analysis in ranked lists of sequences
Motif analysis has long been an important method to characterize biological functionality and the current growth of sequencing-based genomics experiments further extends its potential. These diverse experiments often generate sequence lists ranked by some functional property. There is therefore a growing need for motif analysis methods that can exploit this coupled data structure and be tailore...
متن کاملStability of Ranked Gene Lists in Large Microarray Analysis Studies
This paper presents an empirical study that aims to explain the relationship between the number of samples and stability of different gene selection techniques for microarray datasets. Unlike other similar studies where number of genes in a ranked gene list is variable, this study uses an alternative approach where stability is observed at different number of samples that are used for gene sele...
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ژورنال
عنوان ژورنال: Austrian Journal of Statistics
سال: 2017
ISSN: 1026-597X
DOI: 10.17713/ajs.v46i3-4.676